Genedata Screener

Supporting All Your Instruments

Genedata Screener provides a platform where scientists can analyze all their data in the same workflow, leading to improved analysis speed, results quality, and collaboration across the research organization.

Screener Compatibility

Genedata Screener supports the import of numerical data from plate-based instruments, regardless of plate format and number of numerical features per well. In addition, Genedata Screener can import data such as time- or temperature-series, and cellular feature vectors generated in flow cytometry or high content screening (HCS) assays. The data import for all these types of data is handled by import APIs based on Python or Java, which parse the data sources for well values and associated meta data and transmit them to the Genedata Screener workflow. Such implementations for data import are often very specific to the customer’s workflow and typically maintained by the customer. However, we provide sample and start implementations.

Screener Ready-to-Run

In addition to the described compatibility of Genedata Screener, specific API implementations are available for selected instruments and environments. These integrations were developed by Genedata together with instrument vendors to provide customers with easily available integrations for complex screening technologies such as HCS or automated patch clamp (APC). These require little to no configuration and are referred to as Ready-to-Run integrations. The integrations are instrument specific, come with defined functionality, and are maintained by Genedata as part of a software license agreement. Below is a list of instruments currently supported by the Ready-to-Run program.



SPECTROstar® Nano*

Omega Series*



iQue® Screener

iQue® Screener HD

iQue® Screener PLUS

Echo® Liquid Handlers
(requires Echo® Combination Screen Software)

Access™ Workstation
(requires Echo® Combination Screen Software)

ImageXpress® Micro Systems
(requires MDCStore™ Solution)

MetaXpress® Software
(requires MDCStore™ Solution)

SyncroPatch 384PE


Cellomics™ Store
(accessed via HCS Connect)

acumen® Cellista*


*Integration under development.

All trademarks belong to their respective owners.

Is your instrument not on the list? Take a look at the Integrations tab on this page, or contact us directly. We are collaborating with many instrument vendors and will add integrations based on market need.

Detailed information on how we support these instruments, applicable software versions, and functional additions and restrictions can be requested from Or, if you already are a customer, contact your Scientific Account Manager.

Integrations with Screener

In addition to the Ready-to-Run integrations, Genedata maintains Out-of-the-box integrations that have been specifically requested by our customers. These are part of Genedata Screener and can be used directly after installing Screener.

Both of the above types of integrations are maintained by Genedata, but many other instrument integrations are installed and maintained by our customers. Because we are often not involved in these integrations, we do not have a full list of all instruments and software currently running with Screener. However, below you will find some examples of successful customer integrations.

Acea Biosciences

Successful Customer Integration

  • xCELLigence RTCA HT

BD Biosciences

Successful Customer Integration

  • BD Pathway™


Successful Customer Integration

  • Synergy™ 4

BMG Labtech

Ready-to-Run Integration

  • CLARIOstar®*
  • PHERAstar® FSX*
  • SPECTROstar® Nano*
  • Omega Series*

*Integration under development.


Successful Customer Integration

  • Corning™ Epic™


Ready-to-Run Integration

  • WAVE
  • WAVEdelta


Successful Customer Integration

  • Definiens (HCS)

Essen Bioscience

Successful Customer Integration

  • IncuCyte ZOOM


Out-of-the-box Integration

  • Fluxion IonFlux™

GE Healthcare

Out-of-the-box Integration

  • Biacore 4000®
  • Biacore T100®
  • Biacore T200®
  • Biacore S51®
  • Biacore S200®

Successful Customer Integration

  • IN Cell 2000
  • IN Cell 2200
  • IN Cell 3000
  • IN Cell 6000
  • IN Cell Investigator


Successful Customer Integration

  • FDSS7000Ex


Ready-to-Run Integration

  • iQue® Screener
  • iQue® Screener HD
  • iQue® Screener PLUS

Johnson & Johnson

Out-of-the-box Integration

  • Johnson & Johnson ThermoFluor®


Ready-to-Run Integration

  • Echo® Liquid Handlers
    (requires Echo® Combination Screen Software)
  • Access™ Workstation
    (requires Echo® Combination Screen Software)


Successful Customer Integration

  • Luminex™ 100/200™


Successful Customer Integration


Molecular Devices

Ready-to-Run Integration

  • ImageXpress® Micro Systems
    (requires MDCStore™ Solution)
  • MetaXpress® Software
    (requires MDCStore™ Solution)

Out-of-the-box Integration

  • IonWorks Barracuda™
  • IonWorks™ Quattro
  • MDCStore™

Successful Customer Integration

  • Cellkey™
  • FLIPR™
  • ImageXpress™
  • IonFlux™
  • SpectraMax™


Ready-to-Run Integration

  • SyncroPatch 384PE


Out-of-the-box Integration

  • openBIS for HCS


Out-of-the-box Integration

  • Columbus

Successful Customer Integration

  • Acapella™
  • EnSpire™
  • EnVision™
  • EZ Reader
  • Harmony™
  • LabChip®
  • LumiLux™
  • MicroBeta™
  • Opera™
  • Operetta™
  • TopCount
  • ViewLux™ uHTS


Successful Customer Integration

  • LightCycler™


Out-of-the-box Integration

  • SciEX Mass Spectrometry Instruments

Sierra Sensors

Ready-to-Run Integration

  • Mass-2*

*Integration under development


Successful Customer Integration

  • Infinite™ 200 PRO

Thermo Fisher

Ready-to-Run Integration

  • Cellomics™ Store
    (Accessed via HCS Connect)

Successful Customer Integration

  • ArrayScan™

TTP Labtech

Ready-to-Run Integration

  • acumen® Cellista*
  • mirrorball®*

*Integration under development


Out-of-the-box Integration

  • Waters Mass Spectrometry Instruments


Successful Customer Integration

  • CellVoyager™ CV6000

Collaborate to Integrate with Genedata Screener

Genedata Screener has customers among most of the major pharmaceutical companies, where our screening analysis solutions are applied within a great range of technologies. If you would like your systems to connect directly to the Screener software and thereby be easily accessible to our customers, we can collaborate with you to create a Genedata Screener Ready-to-Run integration package.

A Ready-to-Run package offers a functionally rich integration between a screening instrument and Genedata Screener. This allows companies that are already running a Screener installation to easily add your instrument to their screening workflow and to run their analyses using methods of their choice.

By collaborating with us to create a Ready-to-Run integration package you gain the right to market your system as Screener compatible, to use our Ready-to-Run logo, and to participate when and where we market the Ready-to-Run program.

Contact us directly to discuss a possible Genedata Screener Ready-to-Run integration package.