Genedata Selector

for Agribusiness

High-throughput sequencing is having a significant influence on traditional plant breeding and genetic engineering approaches for crop improvement, generating a wealth of new information.  While the data can be highly valuable, its potential can only be realized when made readily accessible to scientists and integrated with tools for biological interpretation.

Addressing these key challenges for smarter crop breeding and engineering applications requires an intelligent data management solution; Genedata SelectorTM for Agribusiness is the scalable, integrated, centralized, and secure solution you need to handle today's and tomorrow's informatics challenges.

Leading companies use Genedata Selector for Agribusiness to manage and interpret diverse genome and strain data from plants to prokaryotes.

See below how our agribusiness clients use the key features in Genedata Selector to meet their goals.  

A Solution for Scientist and Bioinformaticians

Find out how Genedata Selector can help you to tackle key agribusiness informatics challenges and focus on scientific reasoning versus manually handling of complex data.

Smarter Interpretation and Management of Genome and Strain Data
  • The database at the core of Selector serves as a hub to manage a full network of knowledge, and connect a wide range of data types together
  • Diverse data types such as genome sequences, enzymatic pathways, phenotype, and sequence based intellectual property information can be easily stored, queried and analyzed within Selector
  • Knowledge and relevant information associated with genomes and derivative strains can be queried and restored from existing in-house and public data sources and networks through built-in agents
  • New data can be annotated with knowledge from previous studies and outside information

Efficient Genome Comparison and Strain Analysis
  • Intuitive sequence visualizations, feature-rich genome browser and sequence analysis programs (incl. BLAST) enable for an efficient and easy comparison of different genomes, within gene families and across species
  • In-depth and interactive analysis of proprietary and public genomes enable a highly scalable investigation on thousands of prokaryotic and eukaryotic genomes
  • From genes to the nucleotide or amino acid level through the integrated drill-down function

Biological Interpretation, Mutation Profiling and Pathway Optimization
  • Systematic identification of mutation hot spots and evaluation of their impact on genes, pathways, and overall production phenotypes
  • Advanced tools for pathway activation analyses with transcriptomic, proteomic, and metabolomic profiling data in the context of specific pathways.
  • Cross-organism pathway analyses enable to quickly identify the most suitable strain for experimentation, test functional hypotheses, and perform strain optimization studies
  • Storage and analysis of public and proprietary pathway data

Automated, Standardized Raw Data Processing and Statistics
  • Quantification of next-generation sequencing, microarray, real time-PCR, and other genomic technologies can be easily managed, visualized and analyzed
  • Automatic pre-processing of raw data according to user-designed workflows
  • Automatic annotation of selected regions of interest using established search engines to identify and validate proteins and metabolites
  • Phenotype-genotype correlation analyses across diverse strain collections and strain genealogies

 

 

A Solution for Technology Professionals

Find out how easily data management challenges can be solved with Genedata Selector making knowledge always accessible to scientists to make the most informed decisions

Open, Scalable and Robust Data Management Architecture
  • Centralized data management enabling  integration of  public and proprietary genome sequences in one system
  • Open interfaces provide a seamless integration with in-house and third-party systems
  • Enables users from multiple groups and sites to access the system for improved collaboration and knowledge sharing
  • Ensures uninterrupted availability and security of intellectual property (IP)

Our software can be hosted, or Installed on-site for management by you, or Genedata.


    Our solution portfolio consists of software, scientific consulting, and professional services. Genedata scientific consulting addresses the complete life cycle of R&D projects – from early-stage feasibility studies through late-stage product development – delivering a full portfolio of analysis and bioinformatics services. Our broad spectrum of professional services ranges from custom software development, strategic co-development projects, and data loading/integration to hosting and IT services.